{ "_id": "6a49ee54955f025f549e35ea", "Package": "funkyheatmap", "Title": "Generating Funky Heatmaps for Data Frames", "Description": "Allows generating heatmap-like visualisations for data\nframes. Funky heatmaps can be fine-tuned by providing\nannotations of the columns and rows, which allows assigning\nmultiple palettes or geometries or grouping rows and columns\ntogether in categories. Saelens et al. (2019)\n.", "Version": "0.5.2", "Authors@R": "c(\nperson(\n\"Robrecht\",\n\"Cannoodt\",\nemail = \"rcannood@gmail.com\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0003-3641-729X\", github = \"rcannood\")\n),\nperson(\n\"Wouter\",\n\"Saelens\",\nemail = \"wouter.saelens@gmail.com\",\nrole = c(\"aut\"),\ncomment = c(ORCID = \"0000-0002-7114-6248\", github = \"zouter\")\n),\nperson(\n\"Louise\", \"Deconinck\",\nemail = \"louise.deconinck@gmail.com\",\nrole = \"ctb\",\ncomment = c(ORCID = \"0000-0001-8100-6823\", github = \"LouiseDck\")\n),\nperson(\n\"Artuur\", \"Couckuyt\",\nrole = \"ctb\",\ncomment = c(ORCID = \"0000-0001-7858-6521\")\n),\nperson(\n\"Nick\", \"Markov\",\nrole = \"ctb\",\ncomment = c(ORCID = \"0000-0002-3659-4387\", github = \"mxposed\")\n),\nperson(\n\"Luke\", \"Zappia\",\nemail = \"luke@lazappi.id.au\",\nrole = \"ctb\",\ncomment = c(ORCID = \"0000-0001-7744-8565\", github = \"lazappi\")\n))", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.2", "VignetteBuilder": "knitr", "RdMacros": "Rdpack", "LazyData": "true", "URL": "https://funkyheatmap.github.io/funkyheatmap/,\nhttps://github.com/funkyheatmap/funkyheatmap", "BugReports": "https://github.com/funkyheatmap/funkyheatmap/issues", "Config/testthat/edition": "3", "Config/testthat/parallel": "true", "Config/pak/sysreqs": "libfontconfig1-dev libfreetype6-dev libicu-dev", "Repository": "https://funkyheatmap.r-universe.dev", "Date/Publication": "2025-04-11 06:34:45 UTC", "RemoteUrl": "https://github.com/funkyheatmap/funkyheatmap", "RemoteRef": "HEAD", "RemoteSha": "d66dd6d65b4e29fb3f6a300627a4db367ad9db0c", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-13 07:40:35 UTC", "User": "root" }, "Author": "Robrecht Cannoodt [aut, cre] (ORCID:\n, github: rcannood),\nWouter Saelens [aut] (ORCID: ,\ngithub: zouter),\nLouise Deconinck [ctb] (ORCID: ,\ngithub: LouiseDck),\nArtuur Couckuyt [ctb] (ORCID: ),\nNick Markov [ctb] (ORCID: ,\ngithub: mxposed),\nLuke Zappia [ctb] (ORCID: ,\ngithub: lazappi)", "Maintainer": "Robrecht Cannoodt ", "_user": "funkyheatmap", "_type": "src", "_file": "funkyheatmap_0.5.2.tar.gz", "_fileid": "https://r2.ropensci.org/11d28f0f75964bbe159fecbaf0782b572e88655e00fd61d2f62074bd9e28a0f3", "_filesize": 1464740, "_sha256": "11d28f0f75964bbe159fecbaf0782b572e88655e00fd61d2f62074bd9e28a0f3", "_expires": "2026-10-13T05:40:35.000Z", "_created": "2026-06-13T07:40:35.000Z", "_published": "2026-07-05T05:40:36.738Z", "_jobs": [ { "job": 85196312709, "time": 194, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7608751517" }, { "job": 85196312734, "time": 162, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7608747472" }, { "job": 85196312690, "time": 187, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7608747336" }, { "job": 85196312756, "time": 149, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7608742672" }, { "job": 85196320852, "time": 205, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7608727085" }, { "job": 85196312805, "time": 132, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7608743942" }, { "job": 85196312742, "time": 118, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7608742699" }, { "job": 85196312774, "time": 131, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7608743665" }, { "job": 85196312796, "time": 118, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7608742201" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/funkyheatmap/actions/runs/27460556236", "_status": "success", "_upstream": "https://github.com/funkyheatmap/funkyheatmap", "_commit": { "id": "d66dd6d65b4e29fb3f6a300627a4db367ad9db0c", "author": "Daniel S. Katz ", "committer": "GitHub ", "message": "Minor changes in paper.md (#71)\n\n", "time": 1744353285 }, "_maintainer": { "name": "Robrecht Cannoodt", "email": "rcannood@gmail.com", "login": "rcannood", "linkedin": "in/robrechtcannoodt", "orcid": "0000-0003-3641-729X", "description": "CEO and Founder at @edaro", "uuid": 553642 }, "_distro": "noble", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 2.10", "role": "Depends" }, { "package": "assertthat", "role": "Imports" }, { "package": "cli", "role": "Imports" }, { "package": "cowplot", "role": "Imports" }, { "package": "dplyr", "role": "Imports" }, { "package": "ggforce", "role": "Imports" }, { "package": "ggplot2", "version": ">= 3.4.0", "role": "Imports" }, { "package": "grDevices", "role": "Imports" }, { "package": "jsonlite", "role": "Imports" }, { "package": "patchwork", "role": "Imports" }, { "package": "purrr", "role": "Imports" }, { "package": "RColorBrewer", "role": "Imports" }, { "package": "Rdpack", "role": "Imports" }, { "package": "stringr", "role": "Imports" }, { "package": "tibble", "role": "Imports" }, { "package": "tidyr", "role": "Imports" }, { "package": "kableExtra", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "magick", "role": "Suggests" }, { "package": "readr", "role": "Suggests" } ], "_owner": "funkyheatmap", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 199, "_contributors": [ { "user": "rcannood", "count": 125, "uuid": 553642 }, { "user": "louisedck", "count": 17, "uuid": 36621934 }, { "user": "danielskatz", "count": 1, "uuid": 2913845 }, { "user": "jromanowska", "count": 1, "uuid": 23313172 }, { "user": "lazappi", "count": 1, "uuid": 6869320 } ], "_userbio": { "uuid": 131779657, "type": "organization", "name": "funkyheatmap" }, "_downloads": { "count": 354, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/funkyheatmap" }, "_devurl": "https://github.com/funkyheatmap/funkyheatmap", "_pkgdown": "https://funkyheatmap.github.io/funkyheatmap/", "_searchresults": 113, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/funkyheatmap.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "LICENSE", "manual.pdf" ], "_homeurl": "https://github.com/funkyheatmap/funkyheatmap", "_realowner": "funkyheatmap", "_cranurl": true, "_releases": [ { "version": "0.1.0", "date": "2022-11-28" }, { "version": "0.2.0", "date": "2023-01-14" }, { "version": "0.3.0", "date": "2023-03-02" }, { "version": "0.4.0", "date": "2023-08-29" }, { "version": "0.5.0", "date": "2023-09-23" }, { "version": "0.5.1", "date": "2025-01-17" }, { "version": "0.5.2", "date": "2025-04-09" } ], "_exports": [ "funky_heatmap", "geom_rounded_rect", "position_arguments", "scale_minmax", "verify_column_groups", "verify_column_info", "verify_data", "verify_legends", "verify_palettes", "verify_row_groups", "verify_row_info" ], "_datasets": [ { "name": "dynbenchmark_data", "title": "The results data frame from dynbenchmark.", "object": "dynbenchmark_data", "class": [ "list" ], "fields": [], "table": false, "tojson": false }, { "name": "scib_summary", "title": "Summary results from the scIB project", "object": "scib_summary", "class": [ "tbl_df", "tbl", "data.frame" ], "fields": [ "method", "output", "features", "scaling", "avg_rank", "overall_immune_cell_hum", "overall_immune_cell_hum_mou", "overall_lung_atlas", "overall_mouse_brain", "overall_pancreas", "overall_simulations_1_1", "overall_simulations_2", "rank_immune_cell_hum", "rank_immune_cell_hum_mou", "rank_lung_atlas", "rank_mouse_brain", "rank_pancreas", "rank_simulations_1_1", "rank_simulations_2", "package_score", "package_rank", "paper_score", "paper_rank", "time_score", "time_rank", "memory_score", "memory_rank" ], "rows": 20, "table": true, "tojson": true } ], "_help": [ { "page": "dynbenchmark_data", "title": "The results data frame from dynbenchmark.", "topics": [ "dynbenchmark_data" ] }, { "page": "funky_heatmap", "title": "Generate a funky heatmaps for benchmarks", "topics": [ "funky_heatmap" ] }, { "page": "geom_rounded_rect", "title": "Rounded rectangles", "topics": [ "geom_rounded_rect" ] }, { "page": "position_arguments", "title": "Defines parameters for positioning in a plot.", "topics": [ "position_arguments" ] }, { "page": "scale_minmax", "title": "Scale a vector to the range [0, 1]", "topics": [ "scale_minmax" ] }, { "page": "scib_summary", "title": "Summary results from the scIB project", "topics": [ "scib_summary" ] }, { "page": "verify_column_groups", "title": "Verify the integrity of the column groups object", "topics": [ "verify_column_groups" ] }, { "page": "verify_column_info", "title": "Verify the integrity of the column info object", "topics": [ "verify_column_info" ] }, { "page": "verify_data", "title": "Verify the integrity of the data object", "topics": [ "verify_data" ] }, { "page": "verify_legends", "title": "Verify the integrity of the legends object", "topics": [ "verify_legends" ] }, { "page": "verify_palettes", "title": "Verify the integrity of the palettes object", "topics": [ "verify_palettes" ] }, { "page": "verify_row_groups", "title": "Verify the integrity of the row groups object", "topics": [ "verify_row_groups" ] }, { "page": "verify_row_info", "title": "Verify the integrity of the row info object", "topics": [ "verify_row_info" ] } ], "_pkglogo": "https://raw.githubusercontent.com/funkyheatmap/logo/refs/heads/main/src/funkyheatmap_edited.png", "_readme": "https://github.com/funkyheatmap/funkyheatmap/raw/HEAD/README.md", "_rundeps": [ "assertthat", "base64enc", "cli", "cowplot", "cpp11", "dplyr", "farver", "generics", "ggforce", "ggplot2", "glue", "gtable", "isoband", "jsonlite", "labeling", "lifecycle", "magrittr", "MASS", "patchwork", "pillar", "pkgconfig", "polyclip", "purrr", "R6", "rbibutils", "RColorBrewer", "Rdpack", "rlang", "S7", "scales", "stringi", "stringr", "systemfonts", "tibble", "tidyr", "tidyselect", "tweenr", "utf8", "vctrs", "viridisLite", "withr" ], "_vignettes": [ { "source": "funkyheatmap.Rmd", "filename": "funkyheatmap.html", "title": "Getting started with funkyheatmap", "engine": "knitr::rmarkdown", "headings": [ "Loading the data", "Adding column_info", "Adding palettes", "Adding column_groups", "Specifying geoms", "Customising legends", "Adding images", "Row grouping" ], "created": "2025-04-09 08:42:55", "modified": "2025-04-09 08:42:55", "commits": 1 }, { "source": "scIB.Rmd", "filename": "scIB.html", "title": "Recreating the scIB figures", "engine": "knitr::rmarkdown", "headings": [ "Introduction", "Summary figure", "Data", "Column information", "Row information", "Palettes", "Legends", "Figure", "References" ], "created": "2023-08-29 08:41:53", "modified": "2024-11-13 21:39:16", "commits": 4 } ], "_score": 7.953991511221089, "_indexed": true, "_nocasepkg": "funkyheatmap", "_universes": [ "funkyheatmap", "rcannood" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.5.2", "date": "2026-06-13T07:43:28.000Z", "distro": "noble", "commit": "d66dd6d65b4e29fb3f6a300627a4db367ad9db0c", "fileid": "https://r2.ropensci.org/8d38ff3b28cbd9d03012361a16f106e6cf493c75e8d464ea965b3477c1fac4d0", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/funkyheatmap/actions/runs/27460556236" }, { "r": "4.6.0", "os": "linux", "version": "0.5.2", "date": "2026-06-13T07:42:55.000Z", "distro": "noble", "commit": "d66dd6d65b4e29fb3f6a300627a4db367ad9db0c", "fileid": "https://r2.ropensci.org/e15d10192ee86a1bc90e410ca83f02af09306f84ac1d012e3d13dc05da742eeb", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/funkyheatmap/actions/runs/27460556236" }, { "r": "4.5.3", "os": "mac", "version": "0.5.2", "date": "2026-06-13T07:42:56.000Z", "commit": "d66dd6d65b4e29fb3f6a300627a4db367ad9db0c", "fileid": "https://r2.ropensci.org/d61f9a85363875451b341860edd76f66a98c797f46f851bf6e19e2d7e3e1db32", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/funkyheatmap/actions/runs/27460556236" }, { "r": "4.6.0", "os": "mac", "version": "0.5.2", "date": "2026-06-13T07:42:22.000Z", "commit": "d66dd6d65b4e29fb3f6a300627a4db367ad9db0c", "fileid": "https://r2.ropensci.org/3313659f3ed19cb6c0c77e57e394abd358726620ebc3ae31d1a5d7538240fc3e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/funkyheatmap/actions/runs/27460556236" }, { "r": "4.6.0", "os": "wasm", "version": "0.5.2", "date": "2026-06-13T07:43:05.000Z", "commit": "d66dd6d65b4e29fb3f6a300627a4db367ad9db0c", "fileid": "https://r2.ropensci.org/59e49538985f28dfb8b92f09134f319a1b6bebe782f11de40b86a8d79897dc32", "status": "success", "buildurl": "https://github.com/r-universe/funkyheatmap/actions/runs/27460556236" }, { "r": "4.7.0", "os": "win", "version": "0.5.2", "date": "2026-06-13T07:42:02.000Z", "commit": "d66dd6d65b4e29fb3f6a300627a4db367ad9db0c", "fileid": "https://r2.ropensci.org/f94e2eee1a09dead8acdc99bade66ed16a8d5e78b9596ace32a068c58dab390a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/funkyheatmap/actions/runs/27460556236" }, { "r": "4.5.3", "os": "win", "version": "0.5.2", "date": "2026-06-13T07:42:09.000Z", "commit": "d66dd6d65b4e29fb3f6a300627a4db367ad9db0c", "fileid": "https://r2.ropensci.org/feae1ef49b2e3b8a5ad174bf254e2f4bbe71929659909dc32f18cb0458c73288", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/funkyheatmap/actions/runs/27460556236" }, { "r": "4.6.0", "os": "win", "version": "0.5.2", "date": "2026-06-13T07:42:00.000Z", "commit": "d66dd6d65b4e29fb3f6a300627a4db367ad9db0c", "fileid": "https://r2.ropensci.org/4502bc2e233758ddb519cac6f397278fe0e2d2123d1e592c5df3d32c0f2ab857", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/funkyheatmap/actions/runs/27460556236" } ] }